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Companion Website

Sansom & Horton: Internet for Molecular Biologists

Chapter 03

NCBI network of human genome resources
Resource URL
Clone Registry http://www.ncbi.nlm.nih.gov/genome/clone/index.html
NCBI Contig http://www.ncbi.nlm.nih.gob/genome/guide/build.html
dbSNP http://www.ncbi.nlm.nih.gov/SNP/index.html
Human BAC resources http://www.ncbi.nlm.nih.gov/genome/cyto/hbrc.shtml
Human genome BLAST http://www.ncbi.nlm.nih.gov/genome/seq/page.cgi?F=HsBlast.html&ORG=Hs
LocusLink http://www.ncbi.nlm.nih.gov/LocusLink/
Map Viewer http://www.ncbi.nlm.nih.gov/cgi-bin/Entrez/hum_srch?
MGC http://mgc.nci.nih.gov/
RefSeq http://www.ncbi.nlm.nih.gov/LucusLink/refseq.html
UniGene http://www.ncbi.nlm.nih.gov/UniGene/
UniSTS http://www.ncbi.nlm.nih.gov/genome/sts/
Disease- and gene-oriented resources
Resource URL
GDB http://www.gdb.org/gdb/
GeneCards http://bioinfo.weizmann.ac.il/cards/
GeneClinics http://www.geneclinics.org/
Genes and Disease http://www.ncbi.nlm.nih.gov/disease/index.html
HuGENet http://www.cdc.gov/genetics/hugenet
LocusLink http://www.ncbi.nlm.nih.gov/LocusLink/
OMIM http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=OMIM
Polymorphism and mutation databases
Resource Typeª URL
dbSNP V http://www.ncbi.nlm.nih.gov/SNP/index.html
GenomeWeb L http://www.hgmp.mrc.ac.uk/GenomeWeb/human-gen-db-mutation.html
HGBase V http://hgbase.cgr.ki.se/
HGMD M http://archive.uwcm.ac.uk/uwcm/mg/hgmd0.html
HGMD L http://archive.uwcm.ac.uk/uwcm/mg/docs/oth_mut.html
HUGO mutation database L http://www2.ebi.ac.uk/mutations/cotton/dblist.html
IMGT/HLA M http://www.ebi.ac.uk/imgt/hla/
MITOMAP M http://www.gen.emory.edu/mitomap.html
Mutation resources list (MutRes) L http://srs.ebi.ac.uk/srs6bin/cgi-bin/wgetz?-page+LibInfo+-lib+MUTRES
OMIM L http://www.ncbi.nlm.nih.gov:80/entrez/Omim/allresources.html#LocusSpecific
Universal Mutation Database L http://www.umd.necker.fr/disease.html

ª L, links to mutation databases; V, archival variation database; M, mutation or allele database

Clinical resources
Resource Typeª URL
CancerTrials T http://cancertrials.nci.nih.gov/system
ClinicalTrials T http://clinicaltrials.gov/
GeneTests T http://www.genetests.org/
Genetic Alliance S http://www.geneticalliance.org/
Information for Genetics Professionals L, S http://www.kumc.edu/gec/geneinfo.html
OncoLink L http://oncolink.upenn.edu/

ª L, links to clinical resources; S. information on support groups; T, information on clinical trials.