Biocode
The New Age of Genomics
Dawn Field and Neil Davies
From Our Blog
There are four key steps to crafting a paper and getting it ready for submission just as there are four levels for editing or reviewing a paper. These steps will help you develop and perfect your idea before it is read. It is just as important to edit your research as it is to copy edit for grammar before turning in your submission.Â
Posted on June 4, 2018
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Most academics don't have formal training in writing but do it every day. The farther up the career ladder one goes, the more writing becomes a central activity. Most academic writing skills are learned 'on the job', especially by working with more experienced co-authors. Grants, papers, and even books are written to the best of the author's ability and on the weight of the content.
Posted on May 7, 2018
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Where do find your ideas? Are they buried deep in you and suddenly percolate up? Are they glimmers that appear over time until they coalesce into 'an idea'? Are they reactions to something you see, hear, or do. Likely, you've experienced all three and certainly all are the result of accumulated experiences. The last one is special though, in being what we can call 'triggered'. Something triggered your emotions or imagination and you acted in response.
Posted on April 2, 2018
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I previously wrote about how Scientific English is a specialized form of language used in formal presentations and publications. It is rich in 'rare', or extremely low frequency words, and the colocations that define them (i.e. we 'sequence a genome' or 'stretch of 'DNA'). Learning to comprehend the meaning of such formal language requires considerable exposure and writing it well truly exercises one's knowledge of the 'long tail' of vocabulary.
Posted on February 5, 2018
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Thinking is one of the great human abilities. Anyone can do it, anytime, anywhere. One of the best places in the world to be is inside one's head, thinking. If you love to dwell in thought, perhaps you are made for the academic life. Perhaps you are meant to be a 'creative': producing art, music, novels, or some other product of original thought. Perhaps you have the DNA of an engineer, designer, or systems analyst ' you enjoy problem solving, the ultimate hard think.
Posted on January 1, 2018
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Yesterday, the second of August, was Earth Overshoot Day for 2017. This date 'marks the date when humanity's demand for ecological resources and services in a given year exceeds what Earth can regenerate in that year.' As of today, we carry a planetary-sized debt. We are running in the red. This most horrible of days only started in 1971. Before that, humans did not have the population size nor the technological capacity to 'out-eat' our larder.
Posted on August 3, 2017
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Where can you share space with royalty, science rock stars such as Stephen Hawking, Neil deGrasse Tyson, and Peter Cox, real rock stars like Brian May of Queen, moon walkers and other astronauts and Nobel Laureates? The Starmus Festival. The stream of achievements proved as intense and dense as expected given the star-line-up, and yet certain aspects of the proceedings proved transcendent
Posted on July 3, 2017
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The public is turning out to be, whether knowingly or not, animal ethnographers. The diversity of pets, farm animals, and wild animals they track with lens is exposing the rarest of behaviors. These behaviors not only make intriguing viewing but serve to widen our thinking about the animal world and perhaps diminish our iron-gripped hold on cleverness. Might we be less willing to destroy creatures whom we believe are 'smart'?
Posted on March 14, 2017
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The breakdown of UK scientific links to the continent through Brexit reminds us that we should be thinking about how to encourage global funding of science. We have one Earth and many topics would benefit from global funding. Some advances are being made. Some advances are being made. Some philanthropic foundations fund without borders, but primarily focus on a specific country still, namely their home country.
Posted on March 16, 2017
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Cute and heartwarming videos of dogs fill the internet. My favourite is the bacon dog tease, but others catch my attention because they reveal extraordinary animal behaviours. For example, there are many of dogs helping other animals, like opening the back door to let in a friend. Dogs are our best animal friends, but there is a new contender. The pig might not be agile enough for Frisbees, or into making 'guilty faces', but like dogs, might save your life in the future.
Posted on February 7, 2017
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I just found out that a scientist whom I greatly admire is writing his first book. Only he's not. He's hired a writer to do the heavy lifting. The hired writer's name won't appear on the cover. He's signed on the dotted line in the invisible ink. Ghostwriters don't write about ghosts, but waft around in the background like them. Unlike real ghosts, such behind-the-scenes authors deal in reality, turning the ideas of 'living' authors into words for them to take credit for.
Posted on November 7, 2016
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Even when speakers are proficient in English, Scientific English can still present challenges. Some bill it as 'a foreign language' even for native English speakers. Anyone who has learned how to use it might first laugh at that comparison and then grit their teeth on the grain of truth. Learning conversational English is a big enough task. Getting good enough to build a career in science fluently using Scientific English is a Herculean task.
Posted on October 3, 2016
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Do you have back pain? Statistics show you likely do. Or you have had it in the past or will in the future. Back pain can be a million different things, and you can get it an equal number of ways. Until you've suffered it, you don't realise how disruptive it can be. Trying to fix back pain is a superb way to make people understand the power of scientific method and how to use it.
Posted on July 28, 2016
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We are all reeling from the vote for Brexit. No one in my scientific circle was for exit. Now all are heavily lamenting it. Even cursing it on Facebook. Scientists voted to stay. Seems the entire science sector was pro-Europe and for many good reasons. Many of the best UK science labs are filled with brilliant researchers from across the EU.
Posted on June 30, 2016
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In science, perhaps the most famous recent award is for the prediction of the existence of the Higgs Boson particle, discovered at CERN's Large Hadron Collider. Overall, the most famous recipient ever is likely Marie Curie. She went down in history as the first person to win two. She took Nobel Prizes in 1903 and 1911 for getting radium and polonium out of pitchblende, with her own elbow power.
Posted on June 2, 2016
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But this question of conscience goes beyond science. There is one clear axis along which we are all asked to act in life ' in favour of 'self' or 'society'. Do we always do what is best when it comes to deciding the balance? In all pursuits there is an innate tension between the interests of self and society. This tension has existed as long as we've had human society of any complexity.
Posted on May 5, 2016
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Many say now is the century of biology, the study of life. Genomics is therefore 'front-and-centre', as DNA, is the software of life. From staring at stars, we are now staring at DNA. We can't use our eyes, like we do in star gazing, but just as telescopes show us the far reaches of the Universe, DNA sequencing machines are reading out our genomes at an astonishing pace.
Posted on March 31, 2016
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2016 is a leap year. A leap year, or intercalary year, is a year with an extra day inserted to keep pace with the seasons. In the Gregorian calendar this falls every four years on Feb 29th. On Leap Day this year a wonderful piece of science was published about an equally rare part of nature ' giant viruses.
Posted on March 7, 2016
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Announced on January 13th by President Obama in his eighth and final State of the Union Address, the multi-billion dollar project will be led by US Vice President, Joe Biden, who has a vested interest in seeing new cures for cancer. Using genomics to cure cancer is being held on par with JFK's desire in 1961 to land men on the moon.
Posted on February 2, 2016
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2016 is here. The New Year is a time for renewal and resolution. It is also a time for dieting. Peak enrolment and attendance times at gyms occur after sumptuous holiday indulgences in December and again when beach wear is cracked out of cold storage in summer. As the obesity epidemic reaches across the globe we need new solutions. We need better ways to live healthy lifestyles.
Posted on January 7, 2016
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Knowledge that we all have DNA and what this means is getting around. The informed public is well aware that our cells run on DNA software called the genome. This software is passed from parent to child, in the long line of evolutionary history that dates back billions of years ' in fact, research published this year pushes back the origin of life on Earth another 300 million years.
Posted on December 3, 2015
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It is hard to quantify the impact of 'role-model' celebrities on the acceptance and uptake of genetic testing and bio-literacy, but it is surely significant. Angelina Jolie is an Oscar-winning actress, Brad Pitt's other half, mother, humanitarian, and now a 'DNA celebrity'. She propelled the topic of familial breast cancer, female prophylactic surgery, and DNA testing to the fore.
Posted on November 5, 2015
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Society owes a debt to Henrietta Lacks. Modern life benefits from long-term access to a small sample of her cells that contained incredibly unusual DNA. As Rebecca Skloot reports in her best-selling book, The Immortal Life of Henrietta Lacks, the story that unfolded after Lacks died at the age of 31 is one of injustice, tragedy, bravery, innovation and scientific discovery.
Posted on October 1, 2015
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Kuwait is changing the playing field. In early July, just days after the June 26th deadly Imam Sadiq mosque bombing claimed by ISIS, Kuwait ruled to instate mandatory DNA-testing for all permanent residents. This is the first use of DNA testing at the national-level for security reasons, specifically as a counter-terrorism measure. An initial $400 million dollars is set aside for collecting the DNA profiles of all 1.3 million citizens and 2.9 million foreign residents
Posted on September 3, 2015
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Today, the amount of global genetic data is doubling on the order of every seven months. This time span has shortened significantly over the past years as the field of genomics continues to mature. A recent study showed genomics is starting to compete with the data outputs of digital giants like Twitter and YouTube.
Posted on August 6, 2015
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Another 'Awareness Day', International Kissing Day, is coming up on July 6. It might not seem obvious but kissing, like most subjects can now be easily linked to the science of DNA. Thus, there could be no more perfect opener for my Double Helix column, given the elegance and beauty of a kiss. To start, there is the obvious biological link between kissing and DNA: propagation of the species. Kissing is not only pleasurable but seems to be a solid way to assess the quality and suitability of a mate.
Posted on July 2, 2015
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One of the most fun and exciting sources of information available for free on the Internet are the videos found on the Technology, Entertainment and Design (TED) website. TED is a hub of stories about innovation, achievement and change, each artfully packaged into a short, highly accessible talk by an outstanding speaker. As of April 2015, the TED website boasts 1900+ videos from some of the most imminent individuals in the world. Selected speakers range from Bill Clinton and Al Gore to Bono and other global celebrities to a range of academics experts.
Posted on June 4, 2015
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DNA is the foundation of life. It codes the instructions for the creation of all life on Earth. Scientists are now reading the autobiographies of organisms across the Tree of Life and writing new words, paragraphs, chapters, and even books as synthetic genomics gains steam. Quite astonishingly, the beautiful design and special properties of DNA makes it capable of many other amazing feats. Here are five man-made functions of DNA, all of which are contributing to the growing 'industrial-DNA' phenomenon.
Posted on May 7, 2015
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Did you see 'blue and black' or 'white and gold'? Or did you miss the 'dress-capade' that exploded the Internet last month? It was started by this post on Tumblr that went viral. Many people warned their heads risked exploding in disbelief. How could people see the same dress in different colours? It appears the variation lies in the way we judge how light reflects off objects of different colours, as Harvard psychologist Steven Pinker explained in Forbes. A follow-on, calmer discussion started about whether this trait could be in our DNA.
Posted on April 1, 2015
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A Practical Genomics Revolution is rolling out, owing to the dropping cost of DNA sequencing technology, accelerated DNA research, and the benefits of applying genetic knowledge in everyday life. We now have 'million-ome' genome sequencing projects and talk of 'billion-omes' is growing audible. Given the expense ' even at only $1000 a genome, a million still costs $1 billion US dollars -- it is only right to ask, 'What will the impact be?'
Posted on March 5, 2015
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Watching the field of genomics evolve over the past 20 years, it is intriguing to notice the word 'genome' cozying up to the word 'million'. Genomics is moving beyond 1k, 10k and 100k genome projects. A new courtship is blossoming. The Obama Administration has just announced a Million Genomes Project ' and it's not even the first. Now both Craig Venter and Francis Collins, leads of the private and public versions of the Human Genome Project, are working on their million-omes.
Posted on February 12, 2015
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Posted on January 1, 2015
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